activating$551598$ - meaning and definition. What is activating$551598$
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What (who) is activating$551598$ - definition

BIOLOGICAL GENE-REGULATION PHENOMENON
Activating RNA

CDK-activating kinase         
  • In animals (for example, H. sapiens, left), a trimeric CAK enzyme containing Cdk7 functions both in the activation of Cdks and in the regulation of transcription by RNA polymerase II. In the budding yeast S. cerevisiae (right) the homologous enzyme, Kin28, does not contribute to Cdk activation but is focused entirely on control of transcription. In this species, an unrelated protein kinase, Cak1, activates Cdks. The fission yeast S. pombe (center) occupies an intermediate position, in which Cdk activation can be achieved both by the Cdk7 homolog Mcs6 and by a Cak1 homolog, Csk1. Cdk7, Kin28 and Mcs6 are all Cdks whose activities are also enhanced by phosphorylation of residues in their T-loops. In budding and fission yeasts, this phosphorylation is carried out by Cak1 and Csk1, respectively. The kinase that phosphorylates Cdk7 in animals is not clear.
FAMILY OF PROTEIN COMPLEXES
CDK-activating kinases
CDK-activating kinase (CAK) activates the cyclin-CDK complex by phosphorylating threonine residue 160 in the CDK activation loop. CAK itself is a member of the Cdk family and functions as a positive regulator of Cdk1, Cdk2, Cdk4, and Cdk6.
APAF1         
  • Apoptosome complex structure
MAMMALIAN PROTEIN FOUND IN HOMO SAPIENS
Apaf-1; Apoptotic peptidase activating factor 1; APAF1 (gene)
Apoptotic protease activating factor 1, also known as APAF1, is a human homolog of C. elegans CED-4 gene.
Activating transcription factor         
CLASS OF DNA-BINDING PROTEINS THAT REGULATE GENE TRANSCRIPTION
Activating Transcription Factor; Activating transcription factors
Activating transcription factor, ATF, is a group of bZIP transcription factors, which act as homodimers or heterodimers with a range of other bZIP factors. First, they have been described as members of the CREB/ATF family, whereas it turned out later that some of them might be more similar to AP-1-like factors such as c-Jun or c-Fos.

Wikipedia

RNA activation

RNA activation (RNAa) is a small RNA-guided and Argonaute (Ago)-dependent gene regulation phenomenon in which promoter-targeted short double-stranded RNAs (dsRNAs) induce target gene expression at the transcriptional/epigenetic level. RNAa was first reported in a 2006 PNAS paper by Li et al. who also coined the term "RNAa" as a contrast to RNA interference (RNAi) to describe such gene activation phenomenon. dsRNAs that trigger RNAa have been termed small activating RNA (saRNA). Since the initial discovery of RNAa in human cells, many other groups have made similar observations in different mammalian species including human, non-human primates, rat and mice, plant and C. elegans, suggesting that RNAa is an evolutionarily conserved mechanism of gene regulation.

RNAa can be generally classified into two categories: exogenous and endogenous. Exogenous RNAa is triggered by artificially designed saRNAs which target non-coding sequences such as the promoter and the 3’ terminus of a gene and these saRNAs can be chemically synthesized or expressed as short hairpin RNA (shRNA). Whereas for endogenous RNAa, upregulation of gene expression is guided by naturally occurring endogenous small RNAs such as miRNA in mammalian cells and C. elegans, and 22G RNA in C. elegans.